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Commit 442e112d by Valera Rozuvan Committed by Alexander Kryklia
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Updated documentation. Try #2.

parent c9c328cf
Showing with 391 additions and 85 deletions
docs/source/graphical_slider_tool.rst
......@@ -4,6 +4,7 @@ Xml format of graphical slider tool [xmodule]
.. module:: xml_format_gst
Format description
==================
......@@ -14,101 +15,102 @@ Graphical slider tool (GST) main tag is::
``graphical_slider_tool`` tag must have two children tags: ``render``
and ``configuration``.
Render tag
----------
Render tag can contain usual html tags mixed with some GST specific tags::
<slider/> - represents jQuery slider
<textbox/> - represents input
<plot/> - represents Flot plot
<slider/> - represents jQuery slider for changing a parameter's value
<textbox/> - represents a text input field for changing a parameter's value
<plot/> - represents Flot JS plot element
Also GST will track all elements inside ``<render></render>`` where ``id``
attribute is set.
attribute is set, and a corresponding parameter referencing that ``id`` is present
in the configuration section below. These will be referred to as dynamic elements.
The contents of the <render> section will be shown to the user after
all occurrences of::
<slider var="{parameter name}" [style="{CSS statements}"]/>
<input var="parameter name" [style="{CSS statements}"] [readonly="true" | readonly="false"]/>
<plot [style="{CSS statements}"]/>
<slider var="{parameter name}" [style="{CSS statements}"] />
<textbox var="{parameter name}" [style="{CSS statements}"] />
<plot [style="{CSS statements}"] />
have been converted to actual sliders, text inputs, and a plot graph.
Everything in square brackets is optional.
Everything in square brackets is optional. After initialization, all
text input fields, sliders, and dynamic elements will be set to the initial
values of the parameters that they are assigned to.
``{parameter name}`` specifies the parameter to which the slider or text
input will be attached to.
[style="{CSS statements}"] specifies valid CSS styling. It will be passed
directly to the browser without any parsing.
There is a one-to-one relationship between a slider and a parameter.
I.e. for one parameter you can put only one ``<slider ...<`` in the
I.e. for one parameter you can put only one ``<slider>`` in the
``<render>`` section. However, you don't have to specify a slider - they
are optional.
There is a many-to-one relationship between text inputs and a
parameter. I.e. for one parameter you can put many '<input ...<' in
parameter. I.e. for one parameter you can put many '<textbox>' elements in
the ``<render>`` section. However, you don't have to specify a text
input - they are optional.
You can put only one ``<plot ...<`` in the ``<render>`` section. It is not
You can put only one ``<plot>`` in the ``<render>`` section. It is not
required.
NOTE: MathJax, independently of this module, will render all TeX code
within the ``<render>`` section into nice mathematical formulas. Just
remember to wrap it in one of::
\( and \) - for inline formulas (formulas surrounded by
standard text)
\[ and \] - if you want the formula to be a separate line
Slider tag
..........
Slider tag must have ``var`` attribute and optional ``style`` attribute::
<slider var='a' style="width:400px;float:left;"/>
<slider var='a' style="width:400px;float:left;" />
After processing slider tags will be replaced by jQuery UI sliders with applied
After processing, slider tags will be replaced by jQuery UI sliders with applied
``style`` attribute.
``Var`` attribute must correspond to parameter in one of ``function`` tags in
``functions`` tag. By moving slider, value of parameter ``a`` will change, and so
result of function, that depends on parameter ``a``, will change.
``var`` attribute must correspond to a parameter. Parameters can be used in any
of the ``function`` tags in ``functions`` tag. By moving slider, value of
parameter ``a`` will change, and so result of function, that depends on parameter
``a``, will also change.
Textbox tag
...........
Texbox tag must have ``var`` attribute and optional ``style`` attribute::
Texbox tag must have ``var`` attribute and optional ``style`` and ``readonly``
attributes::
<textbox var="b" style="width:50px; float:left; margin-left:10px;" />
<textbox var="b" readonly="true" style="width:50px; float:left; margin-left:10px;"/>
After processing, textbox tags will be replaced by html text inputs with applied
``style`` attribute. If you want a readonly text input, then you should use a
dynamic element instead (see section below "HTML tagsd with ID").
After processing tetbox tags will be replaced by html inputs with applied
``style`` attribute. If ``readonly`` is set to ``true`` input will be
not-editable, default is ``false``.
``var`` attribute must correspond to a parameter. Parameters can be used in any
of the ``function`` tags in ``functions`` tag. By changing the value on the text input,
value of parameter ``a`` will change, and so result of function, that depends on
parameter ``a``, will also change.
``Var`` attribute must correspond to parameter in one of ``function`` tags in
``functions`` tag. By entering value in input, value of parameter ``b`` will change, and so
result of function, that depends on parameter ``b``, will change.
Plot tag
........
Plot tag may have optional ``style`` attribute::
<plot style="width:50px; float:left; margin-left:10px;"/>
<plot style="width:50px; float:left; margin-left:10px;" />
After processing plot tags will be replaced by Flot plot with applied
After processing plot tags will be replaced by Flot JS plot with applied
``style`` attribute.
HTML tags with id
.................
Any html tag with id, e.g. ``<span id="answer_span_1">`` will be counted as
place where result of function can be rendered. To render function result to
element, element id must be included in ``function`` tag as ``el_id`` attribute
HTML tags with ID (dynamic elements)
....................................
Any HTML tag with ID, e.g. ``<span id="answer_span_1">`` can be used as a
place where result of function can be inserted. To insert function result to
an element, element ID must be included in ``function`` tag as ``el_id`` attribute
and ``output`` value must be ``"element"``::
<function output="element" el_id="answer_span_1">
......@@ -121,17 +123,17 @@ and ``output`` value must be ``"element"``::
</function>
Configuration tag
-----------------
The configuration tag contain sparameter settings, graph
The configuration tag contains parameter settings, graph
settings, and function definitions which are to be plotted on the
graph and that use specified parameters.
Configuration tag contains two mandatory tag ``functions`` and ``parameters`` and
may contain another ``plot`` tag.
Parameters tag
..............
......@@ -143,30 +145,30 @@ Parameters tag
<param var="b" min="-10.0" max="10.0" step="0.1" initial="0" />
</parameters>
``Var`` attribute links min, max, step and initial values to parameter name.
``Min`` attribute is minimal value that parameter can take. Slider and input
``var`` attribute links min, max, step and initial values to parameter name.
``min`` attribute is the minimal value that a parameter can take. Slider and input
values can not go below it.
``Max`` attribute is maximal value that parameter can take. Slider and input
``max`` attribute is the maximal value that a parameter can take. Slider and input
values can not go over it.
``Step`` attribute is value of slider step. When a slider increase or decreases
``step`` attribute is value of slider step. When a slider increase or decreases
the specified parameter, it will do so by the amount specified with 'step'
``Initial`` attribute is the initial value that the specified parameter should be
set to.
``initial`` attribute is the initial value that the specified parameter should be
set to. Sliders and inputs will initially show this value.
The parameter's name is specified by the 'var' property. All occurrences
of sliders and/or text inputs that specify a 'var' property, will be
The parameter's name is specified by the ``var`` property. All occurrences
of sliders and/or text inputs that specify a ``var`` property, will be
connected to this parameter - i.e. they will reflect the current
value of the parameter and will be updated when the parameter
value of the parameter, and will be updated when the parameter
changes.
If at lest one of these attributes is not set, then the parameter
will not be used, slider's and/or text input elements that specify
this parameter will not be activated, and the specified functions
which use this parameter will return a non valid value. This means
which use this parameter will not return a numeric value. This means
that neglecting to specify at least one of the attributes for some
parameter will have the result of the whole GST instance not working
properly.
......@@ -175,12 +177,23 @@ properly.
Functions tag
.............
For the GST to do something, you must defined at least one
function, which can use any of the specified parameter values. The
function expects to take the ``x`` value, do some calculations, and
return the ``y`` value. I.e. this is a 2D plot in Cartesian
coordinates.
coordinates. This is how the default function is meant to be used for
the graph.
There are other special cases of functions. They are used mainly for
outputting to elements, plot labels, or for custom output. Because
the return a single value, and that value is meant for a single element,
these function are invoked only with the set of all of the parameters.
I.e. no ``x`` value is available inside them. They are useful for
showing the current value of a parameter, showing complex static
formulas where some parameter's value must change, and other useful
things.
The different style of function is specified by the ``output`` attribute.
Each function must be defined inside ``function`` tag in ``functions`` tag::
......@@ -202,11 +215,11 @@ by the browser's JavaScript engine and converted to a true JS
function.
The function's parameter list will automatically be created and
populated, and will include the ``x``, and all of the specified
parameter values (from sliders and text inputs). This means that
each of the defined functions will have access to all of the
parameter values. You don't have to use them, but they will be
there.
populated, and will include the ``x`` (when ``output`` is not specified or
is set to ``"graph"``), and all of the specified parameter values (from sliders
and text inputs). This means that each of the defined functions will have
access to all of the parameter values. You don't have to use them, but
they will be there.
Examples::
......@@ -245,43 +258,144 @@ Required parameters::
you would specify the above function like so (the
bare-bone minimum):
<function>return x * a + b;</function>
VERY IMPORTANT: Because the function will be passed
to the browser as a single string, depending on implementation
specifics, the end-of-line characters can be stripped. This
means that single line JavaScript comments (starting with "//")
can lead to the effect that everything after the first such comment
will be treated as a comment. Therefore, it is absolutely
necessary that such single line comments are not used when
defining functions for GST. You can safely use the alternative
multiple line JavaScript comments (such comments start with "/*"
and end with "*/).
VERY IMPORTANT: If you have a large function body, and decide to
split it into several lines, than you must wrap it in "CDATA" like
so:
<function>
return x * a + b;
<![CDATA[
var dNew;
dNew = 0.3;
return x * a + b - dNew;
]]>
</function>
Optional parameters::
color: Color name (red, green, etc.) or in the form of
color: Color name ('red', 'green', etc.) or in the form of
'#FFFF00'. If not specified, a default color (different
one for each function) will be given by Flot;
one for each graphed function) will be given by Flot JS.
line: A string - 'true' or 'false'. Should the data points be
connected by a line on the graph? Default is 'true'.
dot: A string - 'true' or 'false'. Should points be shown for
each data point on the graph? Default is 'false'.
bar: A string - 'true' or 'false'. When set to 'true', points
will be plotted as bars.
label: A string. If provided, will be shown in the legend, along
with the color that was used to plot the function.
output: "element" or "plot". If not defined, function will be plotted.
If defined, function will not be plotted, but rendered to element
with id set in 'el_id' attribute.
el_id: Id of html element, defined in 'render' section. Value of
function will be rendered to content of this element.
output: 'element', 'none', 'plot_label', or 'graph'. If not defined,
function will be plotted (same as setting 'output' to 'graph').
If defined, and other than 'graph', function will not be
plotted, but it's output will be inserted into the element
with ID specified by 'el_id' attribute.
el_id: Id of HTML element, defined in '<render>' section. Value of
function will be inserted as content of this element.
disable_auto_return: By default, if JavaScript function string is written
without a "return" statement, one will be prepended
to it. Set to "true" to disable this functionality.
This is done so that simple functions can be defined
in an easy fashion (for example, "a", which will be
translated into "return a").
With ``output`` and ``el_id`` set together you can update html elements with
function value, also function will not be plotted.
without a "return" statement, the "return" will be
prepended to it. Set to "true" to disable this
functionality. This is done so that simple functions
can be defined in an easy fashion (for example, "a",
which will be translated into "return a").
update_on: A string - 'change', or 'slide'. Default (if not set) is
'slide'. This defines the event on which a given function is
called, and its result is inserted into an element. This
setting is relevant only when "output" is other than "graph".
When specifying ``el_id``, it is essential to set "output" to one of
element - GST will invoke the function, and the return of it will be
inserted into a HTML element with id specified by ``el_id``.
none - GST will simply inoke the function. It is left to the instructor
who writes the JavaScript function body to update all necesary
HTML elements inside the function, before it exits. This is done
so that extra steps can be preformed after an HTML element has
been updated with a value. Note, that because the return value
from this function is not actually used, it will be tempting to
omit the "return" statement. However, in this case, the attribute
"disable_auto_return" must be set to "true" in order to prevent
GST from inserting a "return" statement automatically.
plot_label - GST will process all plot labels (which are strings), and
will replace the all instances of substrings specified by
``el_id`` with the returned value of the function. This is
necessary if you want a label in the graph to have some changing
number. Because of the nature of Flot JS, it is impossible to
achieve the same effect by setting the "output" attribute
to "element", and including a HTML element in the label.
The above values for "output" will tell GST that the function is meant for an
HTML element (not for graph), and that it should not get an 'x' parameter (along
with some value).
[Note on MathJax and labels]
............................
Independently of this module, will render all TeX code
within the ``<render>`` section into nice mathematical formulas. Just
remember to wrap it in one of::
[note on MathJax and labels]:
\( and \) - for inline formulas (formulas surrounded by
standard text)
\[ and \] - if you want the formula to be a separate line
It is possible to define a label in standard TeX notation. The JS
library MathJax will work on these labels also because they are
inserted on top of the plot as standard HTML (text within a DIV).
If the label is dynamic, i.e. it will contain some text (numeric, or other)
that has to be updated on a parameter's change, then one can define
a special function to handle this. The "output" of such a function must be
set to "none", and the JavaScript code inside this function must update the
MathJax element by itself. Before exiting, MathJax typeset function should
be called so that the new text will be re-rendered by MathJax. For example,
<render>
...
<span id="dynamic_mathjax"></span>
</render>
...
<function output="none" el_id="dynamic_mathjax">
<![CDATA[
var out_text;
out_text = "\\[\\mathrm{Percent \\space of \\space treated \\space with \\space YSS=\\frac{"
+(treated_men*10)+"\\space men *"
+(your_m_tx_yss/100)+"\\space prev. +\\space "
+((100-treated_men)*10)+"\\space women *"
+(your_f_tx_yss/100)+"\\space prev.}"
+"{1000\\space total\\space treated\\space patients}"
+"="+drummond_combined[0][1]+"\\%}\\]";
mathjax_for_prevalence_calcs+="\\[\\mathrm{Percent \\space of \\space untreated \\space with \\space YSS=\\frac{"
+(untreated_men*10)+"\\space men *"
+(your_m_utx_yss/100)+"\\space prev. +\\space "
+((100-untreated_men)*10)+"\\space women *"
+(your_f_utx_yss/100)+"\\space prev.}"
+"{1000\\space total\\space untreated\\space patients}"
+"="+drummond_combined[1][1]+"\\%}\\]";
$("#dynamic_mathjax").html(out_text);
MathJax.Hub.Queue(["Typeset",MathJax.Hub,"dynamic_mathjax"]);
]]>
</function>
...
Plot tag
........
......@@ -312,6 +426,15 @@ Optional parameters::
num_points: Number of data points to generated for the plot. If
this is not set, the number of points will be
calculated as width / 5.
bar_width: If functions are present which are to be plotted as bars,
then this parameter specifies the width of the bars. A
numeric value for this parameter is expected.
bar_align: If functions are present which are to be plotted as bars,
then this parameter specifies how to align the bars relative
to the tick. Available values are "left" and "center".
xticks,
yticks: 3 floating point numbers separated by commas. This
specifies how many ticks are created, what number they
......@@ -333,19 +456,89 @@ Optional parameters::
the plotted data will change - the axes (ticks) will
remain as you have defined them.
xticks_names, yticks_names:
A JSON string which represents a mapping of xticks, yticks
values to some defined strings. If specified, the graph will
not have any xticks, yticks except those for which a string
value has been defined in the JSON string. Note that the
matching will be string-based and not numeric. I.e. if a tick
value was "3.70" before, then inside the JSON there should be
a mapping like {..., "3.70": "Some string", ...}. Example:
<xticks_names>
<![CDATA[
{
"1": "Treated", "2": "Not Treated",
"4": "Treated", "5": "Not Treated",
"7": "Treated", "8": "Not Treated"
}
]]>
</xticks_names>
<yticks_names>
<![CDATA[
{"0": "0%", "10": "10%", "20": "20%", "30": "30%", "40": "40%", "50": "50%"}
]]>
</yticks_names>
xunits,
yunits: Units values to be set on axes. Use MathJax. Example:
<xunits>\(cm\)</xunits>
<yunits>\(m\)</yunits>
moving_label:
A way to specify a label that should be positioned dynamically,
based on the values of some parameters, or some other factors.
It is similar to a <function>, but it is only valid for a plot
because it is drawn relative to the plot coordinate system.
Multiple "moving_label" configurations can be provided, each one
with a unique text and a unique set of functions that determine
it's dynamic positioning.
Each "moving_label" can have a "color" attribute (CSS color notation),
and a "weight" attribute. "weight" can be one of "normal" or "bold",
and determines the styling of moving label's text.
Each "moving_label" function should return an object with a 'x'
and 'y properties. Within those functions, all of the parameter
names along with their value are available.
Example (note that "return" statement is missing; it will be automatically
inserted by GST):
<moving_label text="Co" weight="bold" color="red>
<![CDATA[ {'x': -50, 'y': c0};]]>
</moving_label>
asymptote:
Add a vertical or horizontal asymptote to the graph which will
be dynamically repositioned based on the specified function.
It is similar to the function in that it provides a JavaScript body function
string. This function will be used to calculate the position of the asymptote
relative to the axis specified by the "type" parameter.
Required parameters:
type:
Which axis should the asymptote be plotted against. Available values
are "x" and "y".
Optional parameters:
color:
The color of the line. A valid CSS color string is expected.
Example
=======
Plotting, sliders and inputs
----------------------------
.. literalinclude:: gst_example_with_documentation.xml
Update of html elements, no plotting
------------------------------------
......@@ -356,3 +549,15 @@ Circle with dynamic radius
--------------------------
.. literalinclude:: gst_example_dynamic_range.xml
Example of a bar graph
----------------------
.. literalinclude:: gst_example_bars.xml
Example of moving labels of graph
---------------------------------
.. literalinclude:: gst_example_dynamic_labels.xml
docs/source/gst_example_bars.rst 0 → 100644
<vertical>
<graphical_slider_tool>
<render>
<h2>Graphic slider tool: Bar graph example.</h2>
<p>We can request the API to plot us a bar graph.</p>
<div style="clear:both">
<p style="width:60px;float:left;">a</p>
<slider var='a' style="width:400px;float:left;"/>
<textbox var='a' style="width:50px;float:left;margin-left:15px;"/>
<br /><br /><br />
<p style="width:60px;float:left;">b</p>
<slider var='b' style="width:400px;float:left;"/>
<textbox var='b' style="width:50px;float:left;margin-left:15px;"/>
</div>
<plot style="clear:left;"/>
</render>
<configuration>
<parameters>
<param var="a" min="-100" max="100" step="5" initial="25" />
<param var="b" min="-100" max="100" step="5" initial="50" />
</parameters>
<functions>
<function bar="true" color="blue" label="Men">
<![CDATA[if (((x>0.9) && (x<1.1)) || ((x>4.9) && (x<5.1))) { return Math.sin(a * 0.01 * Math.PI + 2.952 * x); }
else {return undefined;}]]>
</function>
<function bar="true" color="red" label="Women">
<![CDATA[if (((x>1.9) && (x<2.1)) || ((x>3.9) && (x<4.1))) { return Math.cos(b * 0.01 * Math.PI + 3.432 * x); }
else {return undefined;}]]>
</function>
<function bar="true" color="green" label="Other 1">
<![CDATA[if (((x>1.9) && (x<2.1)) || ((x>3.9) && (x<4.1))) { return Math.cos((b - 10 * a) * 0.01 * Math.PI + 3.432 * x); }
else {return undefined;}]]>
</function>
<function bar="true" color="yellow" label="Other 2">
<![CDATA[if (((x>1.9) && (x<2.1)) || ((x>3.9) && (x<4.1))) { return Math.cos((b + 7 * a) * 0.01 * Math.PI + 3.432 * x); }
else {return undefined;}]]>
</function>
</functions>
<plot>
<xrange><min>1</min><max>5</max></xrange>
<num_points>5</num_points>
<xticks>0, 0.5, 6</xticks>
<yticks>-1.5, 0.1, 1.5</yticks>
<xticks_names>
<![CDATA[
{
"1.5": "Single", "4.5": "Married"
}
]]>
</xticks_names>
<yticks_names>
<![CDATA[
{
"-1.0": "-100%", "-0.5": "-50%", "0.0": "0%", "0.5": "50%", "1.0": "100%"
}
]]>
</yticks_names>
<bar_width>0.4</bar_width>
</plot>
</configuration>
</graphical_slider_tool>
</vertical>
docs/source/gst_example_dynamic_labels 0 → 100644
<vertical>
<graphical_slider_tool>
<render>
<h1>Graphic slider tool: Dynamic labels.</h1>
<p>There are two kinds of dynamic lables.
1) Dynamic changing values in graph legends.
2) Dynamic labels, which coordinates depend on parameters </p>
<p>a: <slider var="a"/></p>
<br/>
<p>b: <slider var="b"/></p>
<br/><br/>
<plot style="width:400px; height:400px;"/>
</render>
<configuration>
<parameters>
<param var="a" min="-10" max="10" step="1" initial="0" />
<param var="b" min="0" max="10" step="0.5" initial="5" />
</parameters>
<functions>
<function label="Value of a is: dyn_val_1">a * x + b</function>
<!-- dynamic values in legend -->
<function output="plot_label" el_id="dyn_val_1">a</function>
</functions>
<plot>
<xrange><min>0</min><max>30</max></xrange>
<num_points>10</num_points>
<xticks>0, 6, 30</xticks>
<yticks>-9, 1, 9</yticks>
<!-- custom labels with coordinates as any function of parameter -->
<moving_label text="Dynam_lbl 1" weight="bold">
<![CDATA[ {'x': 10, 'y': a};]]>
</moving_label>
<moving_label text="Dynam lbl 2" weight="bold">
<![CDATA[ {'x': -6, 'y': b};]]>
</moving_label>
</plot>
</configuration>
</graphical_slider_tool>
</vertical>
\ No newline at end of file
docs/source/gst_example_dynamic_range.xml
......@@ -19,18 +19,14 @@
<param var="a" min="5" max="25" step="0.5" initial="12.5" />
</parameters>
<functions>
<function color="red">return Math.sqrt(a * a - x * x);</function>
<function color="red">return -Math.sqrt(a * a - x * x);</function>
<function color="red">Math.sqrt(a * a - x * x)</function>
<function color="red">-Math.sqrt(a * a - x * x)</function>
</functions>
<plot>
<xrange>
<!-- dynamic range -->
<min>
return -a;
</min>
<max>
return a;
</max>
<min>-a</min>
<max>a</max>
</xrange>
<num_points>1000</num_points>
<xticks>-30, 6, 30</xticks>
......
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